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Tablet assembly viewer download
Tablet. Tablet is a lightweight, high-performance graphical viewer for next generation sequence assemblies and alignments. Visit the download page to get the latest version of Tablet (; 17th August ). Please cite: Milne I, Stephen G, Bayer M, Cock PJA, Pritchard L, Cardle L, Shaw PD and Marshall D. Follow the instructions provided by the graphical installer to install Tablet. Note that Tablet should not require administrator privileges to install or run, but if you have any problems, don't hesitate to contact us at [email protected] Tablet is primarily developed on Windows 10, and gets additional regular testing on macOS. 4 Dec Summary: Tablet is a lightweight, high-performance graphical viewer for next- generation sequence assemblies and alignments. Supporting a range of input assembly formats, Tablet provides high-quality visualizations showing data in packed or stacked views, allowing instant access and navigation to any.
7 Jun Overview. Tablet is a lightweight, high-performance graphical viewer for next generation sequence assemblies and alignments. The Tablet viewer supports the ACE, AFG, MAQ, SOAP2, SAM, BAM, FASTA, FASTQ, and GFF file formats. Running Tablet requires an X-Windows session connection to the. 24 Mar In our previous publication  (Figure 1), we described Tablet, an assembly viewer designed from the outset to efficiently handle 2GS datasets. It provides biologists and bioinformaticians with fast, interactive visualizations packaged up in an intuitive interface that can be installed and run across a number of. As Neil pointed out, you really need to provide more details. e.g. I can and have used Tablet running on Linux with the display on Mac OS X using ssh. Alternatively, run Tablet on your local machine, and in the open-file dialog stick in a URL. The BAM file format is designed to work nicely like this (as long as.
A lightweight, high-performance graphical viewer for next-generation sequence assemblies and alignments. Supporting a range of input assembly formats, Tablet provides high-quality visualizations showing data in packed or stacked views, allowing instant access and navigation to any region of interest, and whole contig. 11 Sep Tablet currently supports importing assembly data from either ACE, AFG, BAM, MAQ, SAM or SOAPAligner/soap2 Open Assembly Select this option to display the Open Assembly dialog which allows a number of different . removes colour information, and acts like more traditional text-based viewers. Using Tablet for visual exploration of second-generation sequencing data. Milne I , Stephen G, Install Tablet-viewer on Ubuntu/Linux (Version - Sep ) samtools index # create index file). # 3) open in tablet sorted bam file (and related reference sequence). [Open Assembly] .